powerful tools for unique data

Software & Tools

Over the years, the Conrad Lab has developed numerous software and tools, primarily for variant detection and interpretation. More recently, the lab has generated new methods and data resources for testis research that are shared with the broader community. 

DeNovoGear

A program to detect denovo mutations using sequencing data of related individuals or cells
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PSAP

Pipeline to evaluate the statistical significance of mutations identified in n=1 cases of disease
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Affy6CNV

Pipeline for calling CNVs from Affymetrix 6.0 genotyping array data
Download

SATINN

Software for the automated analysis of testis histology images
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HISTA

Interactive web tool and scRNA-seq reference of the human testis
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SpaTA

Multi-species interactive web tool for exploring spatial and single-cell transcriptomic data of the testis.
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